The genome of pest Rhynchophorus ferrugineus reveals gene families important at the plant-beetle interface.
Identifieur interne : 000027 ( Main/Exploration ); précédent : 000026; suivant : 000028The genome of pest Rhynchophorus ferrugineus reveals gene families important at the plant-beetle interface.
Auteurs : Khaled Michel Hazzouri ; Naganeeswaran Sudalaimuthuasari ; Biduth Kundu ; David Nelson ; Mohammad Ali Al-Deeb ; Alain Le Mansour ; Johnston J. Spencer [États-Unis] ; Claude Desplan [États-Unis] ; Khaled M A. Amiri [Émirats arabes unis]Source :
- Communications biology [ 2399-3642 ] ; 2020.
Abstract
The red palm weevil, Rhynchophorus ferrugineus, infests palm plantations, leading to large financial losses and soil erosion. Pest-host interactions are poorly understood in R. ferrugineus, but the analysis of genetic diversity and pest origins will help advance efforts to eradicate this pest. We sequenced the genome of R. ferrugineus using a combination of paired-end Illumina sequencing (150 bp), Oxford Nanopore long reads, 10X Genomics and synteny analysis to produce an assembly with a scaffold N50 of ~60 Mb. Structural variations showed duplication of detoxifying and insecticide resistance genes (e.g., glutathione S-transferase, P450, Rdl). Furthermore, the evolution of gene families identified those under positive selection including one glycosyl hydrolase (GH16) gene family, which appears to result from horizontal gene transfer. This genome will be a valuable resource to understand insect evolution and behavior and to allow the genetic modification of key genes that will help control this pest.
DOI: 10.1038/s42003-020-1060-8
PubMed: 32581279
PubMed Central: PMC7314810
Affiliations:
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Spencer</name><affiliation wicri:level="2"><nlm:affiliation>Department of Entomology, Texas A&M University, TAMU 2475, College Station, TX, USA.</nlm:affiliation><country xml:lang="fr">États-Unis</country><wicri:regionArea>Department of Entomology, Texas A&M University, TAMU 2475, College Station, TX</wicri:regionArea><placeName><region type="state">Texas</region></placeName></affiliation></author><author><name sortKey="Desplan, Claude" sort="Desplan, Claude" uniqKey="Desplan C" first="Claude" last="Desplan">Claude Desplan</name><affiliation wicri:level="1"><nlm:affiliation>Center for Genomics and Systems Biology, New York University Abu Dhabi, PO Box 129188, Abu Dhabi, UAE. cd38@nyu.edu.</nlm:affiliation><country wicri:rule="url">États-Unis</country></affiliation></author><author><name sortKey="Amiri, Khaled M A" sort="Amiri, Khaled M A" uniqKey="Amiri K" first="Khaled M A" last="Amiri">Khaled M A. Amiri</name><affiliation wicri:level="1"><nlm:affiliation>Khalifa Center for Genetic Engineering and Biotechnology, United Arab Emirates University, PO Box 15551, Al Ain, UAE. k.amiri@uaeu.ac.ae.</nlm:affiliation><country wicri:rule="url">Émirats arabes unis</country></affiliation><affiliation wicri:level="1"><nlm:affiliation>Department of Biology, United Arab Emirates University, PO Box 15551, Al Ain, UAE. k.amiri@uaeu.ac.ae.</nlm:affiliation><country wicri:rule="url">Émirats arabes unis</country></affiliation></author></analytic><series><title level="j">Communications biology</title><idno type="eISSN">2399-3642</idno><imprint><date when="2020" type="published">2020</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en">The red palm weevil, Rhynchophorus ferrugineus, infests palm plantations, leading to large financial losses and soil erosion. Pest-host interactions are poorly understood in R. ferrugineus, but the analysis of genetic diversity and pest origins will help advance efforts to eradicate this pest. We sequenced the genome of R. ferrugineus using a combination of paired-end Illumina sequencing (150 bp), Oxford Nanopore long reads, 10X Genomics and synteny analysis to produce an assembly with a scaffold N50 of ~60 Mb. Structural variations showed duplication of detoxifying and insecticide resistance genes (e.g., glutathione S-transferase, P450, Rdl). Furthermore, the evolution of gene families identified those under positive selection including one glycosyl hydrolase (GH16) gene family, which appears to result from horizontal gene transfer. This genome will be a valuable resource to understand insect evolution and behavior and to allow the genetic modification of key genes that will help control this pest.</div></front></TEI><pubmed><MedlineCitation Status="In-Data-Review" Owner="NLM"><PMID Version="1">32581279</PMID><DateRevised><Year>2020</Year><Month>06</Month><Day>27</Day></DateRevised><Article PubModel="Electronic"><Journal><ISSN IssnType="Electronic">2399-3642</ISSN><JournalIssue CitedMedium="Internet"><Volume>3</Volume><Issue>1</Issue><PubDate><Year>2020</Year><Month>Jun</Month><Day>24</Day></PubDate></JournalIssue><Title>Communications biology</Title><ISOAbbreviation>Commun Biol</ISOAbbreviation></Journal><ArticleTitle>The genome of pest Rhynchophorus ferrugineus reveals gene families important at the plant-beetle interface.</ArticleTitle><Pagination><MedlinePgn>323</MedlinePgn></Pagination><ELocationID EIdType="doi" ValidYN="Y">10.1038/s42003-020-1060-8</ELocationID><Abstract><AbstractText>The red palm weevil, Rhynchophorus ferrugineus, infests palm plantations, leading to large financial losses and soil erosion. Pest-host interactions are poorly understood in R. ferrugineus, but the analysis of genetic diversity and pest origins will help advance efforts to eradicate this pest. We sequenced the genome of R. ferrugineus using a combination of paired-end Illumina sequencing (150 bp), Oxford Nanopore long reads, 10X Genomics and synteny analysis to produce an assembly with a scaffold N50 of ~60 Mb. Structural variations showed duplication of detoxifying and insecticide resistance genes (e.g., glutathione S-transferase, P450, Rdl). Furthermore, the evolution of gene families identified those under positive selection including one glycosyl hydrolase (GH16) gene family, which appears to result from horizontal gene transfer. This genome will be a valuable resource to understand insect evolution and behavior and to allow the genetic modification of key genes that will help control this pest.</AbstractText></Abstract><AuthorList CompleteYN="Y"><Author ValidYN="Y"><LastName>Hazzouri</LastName><ForeName>Khaled Michel</ForeName><Initials>KM</Initials><AffiliationInfo><Affiliation>Khalifa Center for Genetic Engineering and Biotechnology, United Arab Emirates University, PO Box 15551, Al Ain, UAE.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Sudalaimuthuasari</LastName><ForeName>Naganeeswaran</ForeName><Initials>N</Initials><AffiliationInfo><Affiliation>Khalifa Center for Genetic Engineering and Biotechnology, United Arab Emirates University, PO Box 15551, Al Ain, UAE.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Kundu</LastName><ForeName>Biduth</ForeName><Initials>B</Initials><AffiliationInfo><Affiliation>Department of Biology, United Arab Emirates University, PO Box 15551, Al Ain, UAE.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Nelson</LastName><ForeName>David</ForeName><Initials>D</Initials><AffiliationInfo><Affiliation>Center for Genomics and Systems Biology, New York University Abu Dhabi, PO Box 129188, Abu Dhabi, UAE.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Al-Deeb</LastName><ForeName>Mohammad Ali</ForeName><Initials>MA</Initials><AffiliationInfo><Affiliation>Department of Biology, United Arab Emirates University, PO Box 15551, Al Ain, UAE.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Le Mansour</LastName><ForeName>Alain</ForeName><Initials>A</Initials><AffiliationInfo><Affiliation>Date Palm Tissue Culture, United Arab Emirates University, PO Box 15551, Al Ain, UAE.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Spencer</LastName><ForeName>Johnston J</ForeName><Initials>JJ</Initials><Identifier Source="ORCID">http://orcid.org/0000-0003-4792-2945</Identifier><AffiliationInfo><Affiliation>Department of Entomology, Texas A&M University, TAMU 2475, College Station, TX, USA.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Desplan</LastName><ForeName>Claude</ForeName><Initials>C</Initials><Identifier Source="ORCID">http://orcid.org/0000-0002-6914-1413</Identifier><AffiliationInfo><Affiliation>Center for Genomics and Systems Biology, New York University Abu Dhabi, PO Box 129188, Abu Dhabi, UAE. cd38@nyu.edu.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Amiri</LastName><ForeName>Khaled M A</ForeName><Initials>KMA</Initials><Identifier Source="ORCID">http://orcid.org/0000-0003-3240-2736</Identifier><AffiliationInfo><Affiliation>Khalifa Center for Genetic Engineering and Biotechnology, United Arab Emirates University, PO Box 15551, Al Ain, UAE. k.amiri@uaeu.ac.ae.</Affiliation></AffiliationInfo><AffiliationInfo><Affiliation>Department of Biology, United Arab Emirates University, PO Box 15551, Al Ain, UAE. k.amiri@uaeu.ac.ae.</Affiliation></AffiliationInfo></Author></AuthorList><Language>eng</Language><GrantList CompleteYN="Y"><Grant><GrantID>G-1205-C</GrantID><Agency>New York University Abu Dhabi</Agency><Country></Country></Grant><Grant><GrantID>G-1205-i</GrantID><Agency>New York University Abu Dhabi</Agency><Country></Country></Grant><Grant><GrantID>KCGEB</GrantID><Agency>United Arab Emirates University (UAEU)</Agency><Country></Country></Grant></GrantList><PublicationTypeList><PublicationType UI="D016428">Journal Article</PublicationType></PublicationTypeList><ArticleDate DateType="Electronic"><Year>2020</Year><Month>06</Month><Day>24</Day></ArticleDate></Article><MedlineJournalInfo><Country>England</Country><MedlineTA>Commun 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IdType="pii">10.1038/s42003-020-1060-8</ArticleId><ArticleId IdType="pmc">PMC7314810</ArticleId></ArticleIdList><ReferenceList><Reference><Citation>Front Physiol. 2018 Mar 21;9:252</Citation><ArticleIdList><ArticleId IdType="pubmed">29618982</ArticleId></ArticleIdList></Reference><Reference><Citation>BMC Genomics. 2016 Jan 22;17:69</Citation><ArticleIdList><ArticleId IdType="pubmed">26800671</ArticleId></ArticleIdList></Reference><Reference><Citation>Philos Trans R Soc Lond B Biol Sci. 1998 Oct 29;353(1376):1701-5</Citation><ArticleIdList><ArticleId IdType="pubmed">10021770</ArticleId></ArticleIdList></Reference><Reference><Citation>Open Biol. 2016 May;6(5):</Citation><ArticleIdList><ArticleId IdType="pubmed">27249798</ArticleId></ArticleIdList></Reference><Reference><Citation>BMC Evol Biol. 2012 Aug 31;12:165</Citation><ArticleIdList><ArticleId IdType="pubmed">22938134</ArticleId></ArticleIdList></Reference><Reference><Citation>PLoS One. 2018 Jul 19;13(7):e0192628</Citation><ArticleIdList><ArticleId IdType="pubmed">30024882</ArticleId></ArticleIdList></Reference><Reference><Citation>J Mol Biol. 1990 Oct 5;215(3):403-10</Citation><ArticleIdList><ArticleId IdType="pubmed">2231712</ArticleId></ArticleIdList></Reference><Reference><Citation>Heredity (Edinb). 2008 Oct;101(4):297-8</Citation><ArticleIdList><ArticleId IdType="pubmed">18665185</ArticleId></ArticleIdList></Reference><Reference><Citation>Mol Ecol. 2015 Jun;24(11):2759-76</Citation><ArticleIdList><ArticleId IdType="pubmed">25851077</ArticleId></ArticleIdList></Reference><Reference><Citation>Cell. 2012 May 11;149(4):740-52</Citation><ArticleIdList><ArticleId IdType="pubmed">22579280</ArticleId></ArticleIdList></Reference><Reference><Citation>Genome Biol. 2016 Nov 11;17(1):227</Citation><ArticleIdList><ArticleId IdType="pubmed">27832824</ArticleId></ArticleIdList></Reference><Reference><Citation>Insect Sci. 2013 Dec;20(6):689-702</Citation><ArticleIdList><ArticleId IdType="pubmed">23955844</ArticleId></ArticleIdList></Reference><Reference><Citation>Bioinformatics. 2017 Jul 15;33(14):2202-2204</Citation><ArticleIdList><ArticleId IdType="pubmed">28369201</ArticleId></ArticleIdList></Reference><Reference><Citation>Genomics. 2015 Nov;106(5):301-9</Citation><ArticleIdList><ArticleId IdType="pubmed">26234643</ArticleId></ArticleIdList></Reference><Reference><Citation>Insect Biochem Mol Biol. 2016 Mar;70:1-9</Citation><ArticleIdList><ArticleId IdType="pubmed">26696544</ArticleId></ArticleIdList></Reference><Reference><Citation>Cell Host Microbe. 2007 Oct 11;2(4):211-3</Citation><ArticleIdList><ArticleId IdType="pubmed">18005738</ArticleId></ArticleIdList></Reference><Reference><Citation>Insect Biochem Mol Biol. 2014 Sep;52:33-50</Citation><ArticleIdList><ArticleId IdType="pubmed">24978610</ArticleId></ArticleIdList></Reference><Reference><Citation>Science. 1983 Jun 3;220(4601):1049-51</Citation><ArticleIdList><ArticleId IdType="pubmed">17754551</ArticleId></ArticleIdList></Reference><Reference><Citation>Proc Biol Sci. 2013 May 22;280(1763):20131021</Citation><ArticleIdList><ArticleId IdType="pubmed">23698014</ArticleId></ArticleIdList></Reference><Reference><Citation>Proc Natl Acad Sci U S A. 2013 Sep 3;110(36):14705-10</Citation><ArticleIdList><ArticleId IdType="pubmed">23959864</ArticleId></ArticleIdList></Reference><Reference><Citation>J Evol Biol. 2009 Mar;22(3):515-26</Citation><ArticleIdList><ArticleId IdType="pubmed">19170822</ArticleId></ArticleIdList></Reference><Reference><Citation>Insect Mol Biol. 2019 Dec;28(6):739-758</Citation><ArticleIdList><ArticleId IdType="pubmed">31120160</ArticleId></ArticleIdList></Reference><Reference><Citation>Genomics. 2012 Nov;100(5):327-35</Citation><ArticleIdList><ArticleId IdType="pubmed">22824654</ArticleId></ArticleIdList></Reference><Reference><Citation>Mol Cell Biol. 2000 Jan;20(2):429-40</Citation><ArticleIdList><ArticleId IdType="pubmed">10611221</ArticleId></ArticleIdList></Reference><Reference><Citation>Sci Rep. 2016 Feb 10;6:20421</Citation><ArticleIdList><ArticleId IdType="pubmed">26861263</ArticleId></ArticleIdList></Reference><Reference><Citation>New Phytol. 2015 Oct;208(2):596-607</Citation><ArticleIdList><ArticleId IdType="pubmed">26061193</ArticleId></ArticleIdList></Reference><Reference><Citation>PeerJ. 2018 Jan 17;6:e4234</Citation><ArticleIdList><ArticleId IdType="pubmed">29372116</ArticleId></ArticleIdList></Reference><Reference><Citation>Annu Rev Entomol. 2007;52:231-53</Citation><ArticleIdList><ArticleId IdType="pubmed">16925478</ArticleId></ArticleIdList></Reference><Reference><Citation>Genetics. 1971 Aug;68(4):581-97</Citation><ArticleIdList><ArticleId IdType="pubmed">5166069</ArticleId></ArticleIdList></Reference><Reference><Citation>Mol Biol Evol. 2007 Aug;24(8):1586-91</Citation><ArticleIdList><ArticleId IdType="pubmed">17483113</ArticleId></ArticleIdList></Reference><Reference><Citation>PLoS One. 2010 Dec 17;5(12):e15635</Citation><ArticleIdList><ArticleId IdType="pubmed">21179425</ArticleId></ArticleIdList></Reference><Reference><Citation>Arch Insect Biochem Physiol. 2013 Dec;84(4):175-93</Citation><ArticleIdList><ArticleId IdType="pubmed">24186432</ArticleId></ArticleIdList></Reference><Reference><Citation>Nature. 2008 Apr 24;452(7190):949-55</Citation><ArticleIdList><ArticleId IdType="pubmed">18362917</ArticleId></ArticleIdList></Reference><Reference><Citation>Mol Biol Evol. 2013 May;30(5):1131-44</Citation><ArticleIdList><ArticleId IdType="pubmed">23436913</ArticleId></ArticleIdList></Reference><Reference><Citation>PLoS One. 2013 Oct 15;8(10):e78379</Citation><ArticleIdList><ArticleId IdType="pubmed">24143263</ArticleId></ArticleIdList></Reference><Reference><Citation>PLoS One. 2010 Jan 08;5(1):e8636</Citation><ArticleIdList><ArticleId IdType="pubmed">20072608</ArticleId></ArticleIdList></Reference><Reference><Citation>Biochem J. 1993 Aug 1;293 ( Pt 3):781-8</Citation><ArticleIdList><ArticleId IdType="pubmed">8352747</ArticleId></ArticleIdList></Reference><Reference><Citation>PLoS One. 2014 Apr 09;9(4):e94052</Citation><ArticleIdList><ArticleId IdType="pubmed">24718603</ArticleId></ArticleIdList></Reference><Reference><Citation>J Hered. 2009 Nov-Dec;100(6):742-53</Citation><ArticleIdList><ArticleId IdType="pubmed">19608790</ArticleId></ArticleIdList></Reference><Reference><Citation>Genome Res. 2009 Sep;19(9):1639-45</Citation><ArticleIdList><ArticleId IdType="pubmed">19541911</ArticleId></ArticleIdList></Reference><Reference><Citation>Proc Natl Acad Sci U S A. 2006 Jul 5;103(27):10358-10363</Citation><ArticleIdList><ArticleId IdType="pubmed">16798875</ArticleId></ArticleIdList></Reference><Reference><Citation>Proc Natl Acad Sci U S A. 2009 Apr 28;106(17):7083-8</Citation><ArticleIdList><ArticleId IdType="pubmed">19365072</ArticleId></ArticleIdList></Reference><Reference><Citation>Biomed Res Int. 2015;2015:216454</Citation><ArticleIdList><ArticleId IdType="pubmed">26347878</ArticleId></ArticleIdList></Reference><Reference><Citation>J Mol Evol. 1996 Sep;43(3):236-40</Citation><ArticleIdList><ArticleId IdType="pubmed">8703089</ArticleId></ArticleIdList></Reference><Reference><Citation>PLoS Biol. 2018 Apr 24;16(4):e2004830</Citation><ArticleIdList><ArticleId IdType="pubmed">29689044</ArticleId></ArticleIdList></Reference><Reference><Citation>Molecules. 2018 Aug 08;23(8):</Citation><ArticleIdList><ArticleId IdType="pubmed">30096781</ArticleId></ArticleIdList></Reference><Reference><Citation>Cytogenet Genome Res. 2015;147(4):217-39</Citation><ArticleIdList><ArticleId IdType="pubmed">26967166</ArticleId></ArticleIdList></Reference><Reference><Citation>Mol Biol Evol. 2019 Sep 1;36(9):2040-2052</Citation><ArticleIdList><ArticleId IdType="pubmed">30968124</ArticleId></ArticleIdList></Reference><Reference><Citation>Sci Rep. 2015 Mar 10;5:8952</Citation><ArticleIdList><ArticleId IdType="pubmed">25752830</ArticleId></ArticleIdList></Reference><Reference><Citation>PLoS One. 2013 Sep 04;8(9):e73827</Citation><ArticleIdList><ArticleId IdType="pubmed">24023907</ArticleId></ArticleIdList></Reference><Reference><Citation>Comp Biochem Physiol B Biochem Mol Biol. 2010 Apr;155(4):403-12</Citation><ArticleIdList><ArticleId IdType="pubmed">20079869</ArticleId></ArticleIdList></Reference><Reference><Citation>Biochem J. 2003 Aug 1;373(Pt 3):957-63</Citation><ArticleIdList><ArticleId IdType="pubmed">12718742</ArticleId></ArticleIdList></Reference><Reference><Citation>IEEE/ACM Trans Comput Biol Bioinform. 2013 May-Jun;10(3):645-56</Citation><ArticleIdList><ArticleId IdType="pubmed">24091398</ArticleId></ArticleIdList></Reference><Reference><Citation>Curr Biol. 2008 Sep 23;18(18):1373-83</Citation><ArticleIdList><ArticleId IdType="pubmed">18789691</ArticleId></ArticleIdList></Reference><Reference><Citation>BMC Bioinformatics. 2014 Nov 25;15:356</Citation><ArticleIdList><ArticleId IdType="pubmed">25420514</ArticleId></ArticleIdList></Reference><Reference><Citation>Genome Biol. 2004;5(6):226</Citation><ArticleIdList><ArticleId IdType="pubmed">15186484</ArticleId></ArticleIdList></Reference><Reference><Citation>Extremophiles. 2000 Dec;4(6):343-9</Citation><ArticleIdList><ArticleId IdType="pubmed">11139076</ArticleId></ArticleIdList></Reference><Reference><Citation>Proc Natl Acad Sci U S A. 2019 Dec 17;116(51):25764-25772</Citation><ArticleIdList><ArticleId IdType="pubmed">31801878</ArticleId></ArticleIdList></Reference><Reference><Citation>Science. 2000 Mar 24;287(5461):2185-95</Citation><ArticleIdList><ArticleId IdType="pubmed">10731132</ArticleId></ArticleIdList></Reference><Reference><Citation>Genome Res. 2011 Jun;21(6):974-84</Citation><ArticleIdList><ArticleId IdType="pubmed">21324876</ArticleId></ArticleIdList></Reference><Reference><Citation>Cell. 2000 Jun 9;101(6):647-56</Citation><ArticleIdList><ArticleId IdType="pubmed">10892651</ArticleId></ArticleIdList></Reference><Reference><Citation>Bioinformatics. 2006 May 15;22(10):1269-71</Citation><ArticleIdList><ArticleId IdType="pubmed">16543274</ArticleId></ArticleIdList></Reference><Reference><Citation>Insect Biochem Mol Biol. 2009 Dec;39(12):861-74</Citation><ArticleIdList><ArticleId IdType="pubmed">19840850</ArticleId></ArticleIdList></Reference><Reference><Citation>PeerJ. 2018 Oct 31;6:e5873</Citation><ArticleIdList><ArticleId IdType="pubmed">30402355</ArticleId></ArticleIdList></Reference><Reference><Citation>Insect Mol Biol. 2010 Mar;19 Suppl 2:141-53</Citation><ArticleIdList><ArticleId IdType="pubmed">20482646</ArticleId></ArticleIdList></Reference><Reference><Citation>Proc Natl Acad Sci U S A. 2013 Jan 8;110(2):E113-22</Citation><ArticleIdList><ArticleId IdType="pubmed">23248300</ArticleId></ArticleIdList></Reference><Reference><Citation>Mol Gen Genet. 1997 Sep;256(2):187-94</Citation><ArticleIdList><ArticleId IdType="pubmed">9349710</ArticleId></ArticleIdList></Reference><Reference><Citation>Sci Rep. 2017 May 11;7(1):1762</Citation><ArticleIdList><ArticleId IdType="pubmed">28496260</ArticleId></ArticleIdList></Reference><Reference><Citation>Brief Bioinform. 2016 Jan;17(1):51-62</Citation><ArticleIdList><ArticleId IdType="pubmed">25998133</ArticleId></ArticleIdList></Reference><Reference><Citation>Insect Biochem Mol Biol. 2011 Mar;41(3):203-9</Citation><ArticleIdList><ArticleId IdType="pubmed">21195177</ArticleId></ArticleIdList></Reference><Reference><Citation>Syst Biol. 2013 Jan 1;62(1):93-109</Citation><ArticleIdList><ArticleId IdType="pubmed">22949483</ArticleId></ArticleIdList></Reference><Reference><Citation>Genome Biol Evol. 2016 Jul 12;8(7):2106-17</Citation><ArticleIdList><ArticleId IdType="pubmed">27289101</ArticleId></ArticleIdList></Reference><Reference><Citation>Mol Biol Evol. 2005 Sep;22(9):1751-63</Citation><ArticleIdList><ArticleId IdType="pubmed">15901838</ArticleId></ArticleIdList></Reference><Reference><Citation>Mol Ecol. 2016 Sep;25(17):4197-215</Citation><ArticleIdList><ArticleId IdType="pubmed">27474484</ArticleId></ArticleIdList></Reference><Reference><Citation>Insect Sci. 2015 Feb;22(1):65-82</Citation><ArticleIdList><ArticleId IdType="pubmed">24347559</ArticleId></ArticleIdList></Reference><Reference><Citation>Genome Biol. 2014 Dec 03;15(12):521</Citation><ArticleIdList><ArticleId IdType="pubmed">25609551</ArticleId></ArticleIdList></Reference></ReferenceList></PubmedData></pubmed><affiliations><list><country><li>Émirats arabes unis</li><li>États-Unis</li></country><region><li>Texas</li></region></list><tree><noCountry><name sortKey="Al Deeb, Mohammad Ali" sort="Al Deeb, Mohammad Ali" uniqKey="Al Deeb M" first="Mohammad Ali" last="Al-Deeb">Mohammad Ali Al-Deeb</name><name sortKey="Hazzouri, Khaled Michel" sort="Hazzouri, Khaled Michel" uniqKey="Hazzouri K" first="Khaled Michel" last="Hazzouri">Khaled Michel Hazzouri</name><name sortKey="Kundu, Biduth" sort="Kundu, Biduth" uniqKey="Kundu B" first="Biduth" last="Kundu">Biduth Kundu</name><name sortKey="Le Mansour, Alain" sort="Le Mansour, Alain" uniqKey="Le Mansour A" first="Alain" last="Le Mansour">Alain Le Mansour</name><name sortKey="Nelson, David" sort="Nelson, David" uniqKey="Nelson D" first="David" last="Nelson">David Nelson</name><name sortKey="Sudalaimuthuasari, Naganeeswaran" sort="Sudalaimuthuasari, Naganeeswaran" uniqKey="Sudalaimuthuasari N" first="Naganeeswaran" last="Sudalaimuthuasari">Naganeeswaran Sudalaimuthuasari</name></noCountry><country name="États-Unis"><region name="Texas"><name sortKey="Spencer, Johnston J" sort="Spencer, Johnston J" uniqKey="Spencer J" first="Johnston J" last="Spencer">Johnston J. Spencer</name></region><name sortKey="Desplan, Claude" sort="Desplan, Claude" uniqKey="Desplan C" first="Claude" last="Desplan">Claude Desplan</name></country><country name="Émirats arabes unis"><noRegion><name sortKey="Amiri, Khaled M A" sort="Amiri, Khaled M A" uniqKey="Amiri K" first="Khaled M A" last="Amiri">Khaled M A. Amiri</name></noRegion><name sortKey="Amiri, Khaled M A" sort="Amiri, Khaled M A" uniqKey="Amiri K" first="Khaled M A" last="Amiri">Khaled M A. Amiri</name></country></tree></affiliations></record>Pour manipuler ce document sous Unix (Dilib)
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